Changes between Version 19 and Version 20 of Procedures/HyperspectralCalibrationCreation

Timestamp:

Jun 7, 2018, 5:31:04 PM (6 years ago)

Author:

asm

Comment:

--

Procedures/HyperspectralCalibrationCreation

@@ -9 +9 @@
 
 == Setup ==
+
+Copy all data to the appropriate location as well as the spreadsheet of the data. Open a new ticket and make a few preliminar notes. Make sure all data is correct, that all files have darkframes recorded and make notes on the ticket if anything went wrong, some data was not recorded or anything that does not make sense. Later on, you will need to specify in the config file the data directory structure, the default is:
+data
+   |-d1 (Number of the day)
+   |    |-fenix
+   |    |     |-raw data of each lampfiles
+   |    |     |-radiometric files   
+   |    |-owl
+   |   (...)
+   |-d2
+(...)
+
+You can change the structure but you will need to specify it on the config file. For the output (you will need to create the dirs) the suggested structure is:
+processed
+   |-d1 (Number of the day)
+   |    |-fenix/
+   |    |     |-anchors/
+   |    |     |-average/
+   |    |     |-dc/
+   |    |     |-output/
+   |    |     |-smile/
+   |    |     |-split/
+   |    |-owl/
+   |   (...)
+   |-d2
+(...)
 
 Relevant scripts are held in the internal 'libarsfcal' git repository
@@ -67 +93 @@
 
 Basic usage of this requires only the name of the config file as an argument. For the case of the fenix, in the best scenario you will need to use:
-```
+{{{
 cal_spectral.py config_file -s fenix --hwhm
-```
+}}}
 To specify that the sensor is Fenix and that the FWHMs read in the hdr are indeed hwhm rather than fwhm.
  You may also want to use the following arguments: