Version 8 (modified by mggr, 15 years ago) (diff) |
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Data arrival by network transfer
- change to arsf user on a safe machine
ssh arsf@gridmaster2 # (or su - arsf and don't turn your machine off!)
- find the exact data path on Ops server
ssh arsfdan@thelma.nerc-arsf.ac.uk # go find the path to the data to download # these will vary.. cd /data/Data_2009/ cd UK cd 281-09_GB08-02_Delamere # check path pwd # returns /data/Data_2009/UK/281-09_GB08-02_Delamere # # check size isn't crazy big # > 150GB and think about a disk transfer du -hsc . # if you get any permission denied errors, fix up permissions then redo the du. # fix permissions with: # /data/permissions_fixer/fix_perms_for_arsfdan.sh DIRECTORY_NEEDING_FIX # **be very careful** with this as you could easily screw up the whole thelma server if you get the directory wrong! logout
- create a temporary directory in ~arsf_data/YYYY/flight_data/unpacking/ to download to, e.g.
DOWNDIR=~/arsf_data/`date +%Y`/flight_data/unpacking/download-`date +%Y%m%d%H%M%S` mkdir $DOWNDIR cd $DOWNDIR
- do the download with rsync, using compression (-z flag). Note there is no trailing / on the PROJECTNAME part of the path below - this is important!
- example rsync command follows, with a --dry-run option to prevent any damage occurring on the trial attempt. If it lists the files you'd expect it to transfer, remove the --dry-run option and repeat. If not, check your slashes!
date rsync --dry-run -avz arsfdan@thelma.nerc-arsf.ac.uk:/PATH/YOU/FOUND/EARLIER/PROJECTNAME . ; date # date commands are optional, they just let you see when it started and stopped
- example rsync command follows, with a --dry-run option to prevent any damage occurring on the trial attempt. If it lists the files you'd expect it to transfer, remove the --dry-run option and repeat. If not, check your slashes!
If something goes wrong after an hour or two, don't delete what you've already downloaded. Instead, repeat the rsync command and it'll pick up where it left off.
Unpacking data
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