Please keep this page updated. Also please keep it sorted in a sensible order or we're never going to be able to find anything...
|  Script  |  Language  |  Use  |  Author 
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|  alspp.exe  |  bash  |  Runs wine version of ALSPP  |  
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|  arsf_winesetup.sh  |  bash  |  Configure wine environment for ARSF users  |  
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|  attune  |  bash  |  Runs wine version of Attune (boresight calibration)  |  
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|  check_ascii_lidar.sh  |  bash  |  Checks the ASCII LiDAR files in the delivery for erroneous data  |  
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|  check_ascii_lidar  |  Binary (C)  |  Checks the ASCII LiDAR files in the delivery for erroneous data, prints the bounds of the ascii file  |  
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|  classify_las  |  Binary (C)  |  LiDAR classification  |   
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|  classify_las_files.sh  |  bash  |  Runs classify_las on a set of LAS files using a specified classification algorithm  |  
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|  create_latex_lidar_readme.py  |  Python  |  Creates a LaTeX file for generating a PDF read-me for delivery  |  
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|  fugroviewer.exe  |  bash  |  Runs wine version of Fugroviewer  |  
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|  fwf_extract.py  |  python  |  Extracts waveform data for specified area  |  
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|  getDEMbufferpy  |  Python  |  Get the buffer size around LiDAR data for use when creating a DEM for use with apl  |  
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|  get_first_return.sh  |  bash  |  Creates new ASCII lidar files with 1st returns only  |  
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|  import_ldr_txt_to_grass.sh  |   bash  |  Imports lidar ascii file into grass (run from within grass)  |  mark1 
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|  lag  |  Binary (C++)  |  LiDAR file viewer  |  harg + chrfi 
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|  las2txt.sh  |  bash  |  Convert a directory of LAS files or a single LAS file into ascii format  |  
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|  las_hdr_pop.py  |  Python  |  Populates LAS file headers with information that may have been lost: min and max of x,y,z and number of points by return  |  knpa 
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|  las_merge.sh  |  bash  |  Merges sets of LAS files of the form  *_000.LAS, *_001.LAS... etc. together  |   
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|  las_sampler.py  |  Python  |  Samples a LAS file at a specified interval and creates an output LAS file of these points  |  knpa 
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|  las_single_class.py  |  Python  |  Classifies all points as a user defined number (quite slow)  |  knpa 
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|  LASsorter  |  Python  |  sorts Las files by time, x, y, z , ascending and descending  |  
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|  leica_photo_processing  |  bash  |  Runs wine version of Leica's photo processor  |  
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|  lidardem.sh  |  Bash  |  Create a DEM from LiDAR data either las of ascii format  |  
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|  lidar_aster_dem.sh  |  Bash  |  Create a DEM from LiDAR and aster data, wrapper from lidardem.sh and asterdem.sh  |  
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|  lidar_stats.py  |  Python  |  Extracts statistics from a set of LAS files  |  emca 
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|  make_lidar_delivery.py  |  bash  |  Create a LiDAR delivery folder  |  
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|  make_lidardem_or_intensity.sh make_lidardem_or_intensity.grass?  |  bash  |  Create a lidar dem or intensity image from ascii lidar files  |  
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|  pt_cloud_filter  |  Binary (C)  |  Removes points of a specified classification from ascii lidar point cloud  |  knpa 
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|  Script  |  Language  |  Use  |  Author 
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|  adjustBPF.py  |  Python  |  Generate a bad pixel file in CSV for a delivery, uses the CSV bad pixel file from calibration  |  
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|  bil_binning.py  |  Python  |  Spectrally bins (x2) a hyperspectral raw file  |  knpa 
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|  bounding_box.py  |  Python  |  Get the North/South/East/West extent of a number of raw hdr files in bng coords  |  knpa 
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|  cal_radiometric.py  |  Python  |  Generates a calibration curve in each band given input data in BIL or BSQ format and a known lamp file  |  benj 
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|  correlate.py  |  Python  |  Wrapper for phasecorrelator.py  |  
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|  check_apl_cmd  |  bash  |  Runs the apl commands in the config file for all level1 flightlines, output to tmp_cmd_check dir  |  adbe 
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|  check_bil.py  |  Python  |  Checks quality of bil files in hyperspectral delivery  |  adbe 
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|  check_fsm.py  |  Python  |  Works out the corrected value for frame shift smear at a given band assuming a constant DN value through the spectrum  |  benj 
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|  check_qpftiming.py  |  Python  |  Test specified Eagle/Hawk framerates against actual framerates calculated from qpfTiming  |  benj 
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|  checkpeaks.py  |  Python  |  Matches measured spectral lines to fityk-detected peaks and eagle/hawk pixel numbers for use in spectral calibration  |  benj 
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|  create_latex_hyperspectral_readme.py  |  Python  |  Create a LaTeX file for a PDF Readme for Hyperspectral azgcorr deliveries  |  
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|  create_latex_hyperspectral_apl_readme.py  |  Python  |  Create a LaTeX file for a PDF Readme for Hyperspectral APL deliveries  |  
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|  dimfixer.py  |  Python  |  Truncates BIL files so that the file size matches what the header file says it should  |  benj 
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|  dummy_linecount.py  |  Python  |  Replaces a broken line counter on the first band of eagle and hawk (values 0 to number of lines)  |  knpa 
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|  fastcheckoverflows.py  |  Python  |  Checks a BIL or BSQ file to see if it contains a specified overflow value  |  benj 
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|  fastQC  |  Binary (C)  |  Program for viewing BIL files (raw data or level 1)  |  harg 
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|  gen_bandsets.py  |  Python  |  Generates bandset (.prn, .bnd, .wls) files from a wavelength scale file  |  benj 
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|  gen_synth_radcal.py  |  Python  |  Generates a synthetic Eagle or Hawk calibration file  |  benj 
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|  gen_synth_raw.py?  |  Python  |  Generates a synthetic Eagle or Hawk dataset  |  benj 
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|  gen_synth_sbet.py?  |  Python  |  Generates a synthetic SBET file  |  benj 
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|  generate_prn.py  |  Python  |  Generates a .prn file from some subset of bands in a given .wls file  |  benj 
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|  generate_apl_runscripts.py  |  Python  |  Generates config file for APL hyperspectral processing  |  
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|  get_ascii_fov_for_level1.py  |  Python  |  Generates an ascii file containing binned and trimmed sensor fov view vectors for level 1 files  |  mark1 
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|  get_boresight_vals.py  |  Python  |  Extracts boresight values for given day from csv file  |  
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|  get_calib_vals.py  |  Python  |  Extracts calibration file names for given day from data file  |  
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|  gen_eg_cmds.py  |  Python  |  Generates example commands for APL for the read me file  |  
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|  get_sbet_bounds.py  |  Python  |  Gets North/South/East/West extent of (part of) an SBET file in lat/lon  |  benj 
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|  getposition  |  Python  |  Gets position information at from an SBET file for a specified time (or file limits)  |  benj 
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|  getsync.py  |  Python  |  Finds sync records on one or more AISA nav files  |  
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|  gettiles.sh  |  bash  |  Determines BNG grid squares for flight from Eagle/Hawk header files  |  benj 
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|  hdr_fps_check.py  |  Python  |  Checks if a Specim file has a mismatch between recorded and actual frame rate (Hawk problem)  |  
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|  hyper_latex_table_tools.py  |  Python  |  Python tools for hyperspectral readme table creation  |  
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 igm2map.sh   igm2map.pro  |  bash  |  Script to use IGM files to generate a GLT file and map level 1 data  |  
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|  interleave_convert.py  |  Python  |  Convert interleave of a 3D file between BIL/BSQ  |  
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|  logwriter.py  |  Python  |  Outputs mean altitude, heading and speed from an SBET file for a number of Eagle or Hawk lines  |  benj 
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 make_mosaic.sh   make_mosaic.grass  |  bash  |  Script to convert GeoTIFFs into JPGs and create a mosaic image (with vectors)  |  
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|  make_hyper_delivery.py  |  Python  |  Make a hyperspectral delivery fro APL data  |  
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|  match_dark_frames.py  |  Python  |  Checks which of a selection of Eagle/Hawk header files have compatible binning, framerate and integration time settings  |  benj 
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|  mergeCFSync.py  |  Python  |  Merges a .cfg and a .sync (eagle/hawk line sct offsets)  |  
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|  nav2txt  |  Binary (C)  |  Output contents of an AISA nav file to an ASCII text file  |  
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|  new_nav_file_fixer.py  |  Python  |  Script to remove once-per-second sync messages from a eagle/hawk nav file that were introduced with the firmware upgrade in October 2011 and sometimes break aplcorr  |  knpa 
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|  phasecorrelator.py  |  Python  |  Perform phase correlation on a lidar intensity image and a hyperspectral image  |  
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|  process_specim_apl_line.py  |  Python  |  Process the specim data using APL  |  
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|  qsub_correlate.py  |  Python  |  Submit a correlation job to the grid  |  
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|  process_specim_line.py  |  Python  |  Runs az suite on specified Eagle/Hawk flightline for processing  |  benj 
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|  run_calibration.py  |  Python  |  Master script for running calibration scripts  |  benj 
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|  split_autodark.py  |  Python  |  Script to split Eagle or Hawk raw files containing autodark frames into a light file and a dark file.  |  benj 
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|  splitline.py  |  Python  |  Script/Library for splitting Eagle/Hawk flightlines, using headers  |  
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|  slice_nav.py  |  Python  |  Cuts a chunk of an AISA nav file out into a smaller nav file  |  
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|  specim_gap_check.py  |  Python  |  Searches Eagle/Hawk raw files for dropped frames by looking at the band 1 frame counter  |  
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|  specim_qsub.py  |  Python  |  Submits an ARSF project for processing through the grid engine  |  benj 
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|  wavelength_scale.py  |  Python  |  Generates a new wavelength scale from matching spectral peaks  |  benj 
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|  Script  |  Language  |  Use  |  Author(s) 
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|  add_to_dem.sh  |  bash/grass  |  Adds an ascii or binary grid to a DEM - useful when doing geoid-spheroid seperation  |  knpa 
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|  archiving_tarballer.sh  |  bash  |  Tarballs projects for NEODC  |  mggr/knpa 
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|  asterdem.sh  |  Bash  |  Creates a ASTER DEM for use with aplcorr  |  knpa/adbe 
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|  atcor  |  bash  |  Runs ATCOR-4  |  
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|  auto_grass_vector_tiff_conversion_driver.sh  auto_grass_vector_tiff_conversion_control_script.grass  |  Python  |  uses grass to produce tiff images of vectors  |   
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|  binary_converter.py  |  Python  |  Converts binary files from one data type to another (eg. Float32 -> Int16)  |    
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|  bil2tiff  |  Bash  |  Convert bil files to geotiffs using gdal  |  
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|  bnglookup.py  |  Python  |  Converts BNG numeric grid references to OS grid square co-ordinates  |   
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|  checkoverflows.py  |  Python  |  Checks binary data files for presence of a specified overflow value  |  
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|  convert_delivery.sh  |  Bash  |  Will convert a delivery to a new project code and PI name. Can also be used on single deliveries to correct PI/proj-code inconsistencies  |  
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|  convert_nonuk_dem.sh  |  Bash / Grass  |  Convert a non-UK DEM into APL format (may have to be in WGS84 heights?)  |  
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|  convert_uk_dem.sh  |  Bash / Grass  |  Convert a UK DEM into APL format  |  
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|  data_arithmetic.py  |  Python  |  Performs an arithmetic operation on all of the values from two data files and writes the results to an output data file  |  
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|  demgen.py  |  Python  |  Reads eagle or hawk header files and SBET file to generate a list of the DEM tiles that the SBET covers  |   
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|  demhdr_az2grass.sh  |  bash  |  Converts dems from az format header to grass header  |   
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|  demheaderconvert.sh  |  bash  |  Converts dems from grass format header to az header  |   
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|  doc2pdf.py  |  Python  |  Converts .doc or .odt files to PDF format  |   
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|  DocumentConverter.py  |  Python  |  Converts between various document formats using Open Office  |  
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|  findbaseline.py  |  Python  |  Script to find the baseline value of a list of numbers containing value spikes. Intended for part of Specim cal procedure.  |  
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|  fix_naughty_chars.py  |  Python  |  Finds linux-unfriendly characters in filenames  |   
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|  fixnames_sct.py  |  Python  |  Auto-renames (line numbers and removes sct section) level 1, level 3, screenshots or rcd images/thumbnails/raws for a delivery.  |  
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|  freelook  |  bash  |  Runs ENVI Freelook  |  
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|  gen_fityk_script.py  |  Python  |  Generates a fityk script file that can be used to fit peaks to particular datasets  |  
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|  generate_readme_config.py  |  Python  |  Creates a config file for hyperspectral and camera read_me generators  |   
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|  generateKMLforPI.py  |  Python  |  Generate a KML file containing Eagle, Hawk or RCD information  |  
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|  GML2Shape.sh  |  bash  |  Convert GML Vector files to Shapefiles  |   
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|  gpstime  |  Python  |  Converts GPS time-of-week to human-readable format and vice-versa  |   
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|  hdf_output.py  |  Python  |  Lists contents of an HDF file to the terminal  |   
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|  hdf_to_bil.py  |  Python  |  Extracts navigation data from hdf files to a bil file  |  chrfi/knpa  
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|  julian  |  CShell  |  Converts between julian day+year and day/month/year  |    
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|  kmloverview_all_projects_this_year.py  |  Python  |  Generate KML Overview for all projects in repository for a given year  |  
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|  ll2bng.sh  |  bash  |  Converts specified lat/lon into BNG co-ordinates (wrapper around appropriate proj command)  |   
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|  lsolder  |  bash  |  Like ls, but can filter list to get files/directories older than a certain time  |  
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|  mask_bad_pixels.py  |  Python  |  Sets defined bad pixels in a BIL or BSQ file to be a mask value  |   
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|  make_delivery_letter_email.py  |  Python  |  Automatically produce delivery letters and emails for a PI  |  
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|  make_kmloverview.py  |  Python  |  Make the KML file and overview support files - part of unpacking procedure  |  
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|  nextmapdem.sh  |  bash  |  Generates a DEM from NextMap data  |  benj/mggr/knpa 
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|  projdir  |  bash  |  Automatically CDs to a project directory  |  anch 
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|  proj_tidy.sh  |  bash  |  Checks that a specified project conforms to the current defined structure and file name formats  |  knpa 
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 raw_eagle_hawk_bil2jpg.sh   raw_eagle_hawk_bil2jpg.grass  |  Create JPGs of raw eagle/hawk data for KML overview  |  
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|  spatial_average.py  |  Python  |  Averages a BIL or BSQ file in the spatial direction  |  
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|  symlink_src_dir.sh  |  bash  |  Symlinks all files in a source directory into a target directory  |   
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|  teqc  |  Binary (third-party)  |  Program for slicing/splicing/fiddling with RINEX or other GPS base station data (like raw data)  |   
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|  times4grafnav.py  |  Python  |  Searches E/H headers and gets start/stop times for importing into Grafnav to show on trajectory  |   
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|  trmdatefinder.py  |  Python  |  Extracts date from Trimble GPS format file names  |  
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|  Script  |  Language  |  Use  |  Author 
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|  alphaconv.py  |  Python  |  Functions to convert numbers to letters and back (A=1, B=2 etc)  |  
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|  arsf_database.py  |  Python  |  Functions to access key/value ARSF database (please use arsf_db_reader.py)  |  
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|  arsf_db_reader.py  |  Python  |  Provides classes and functions to read from the ARSF database  |  
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|  band_reader.py  |  Python  |  Reads AISA band (.prn) files  |  
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|  configSorter.py  |  Python  |  Sorts config files into sensible order (can also be executed directly)  |  
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|  convert_interpolate.py  |  Python  |  Interpolates an array and/or many arrays wrt. one array. Finds peaks/Derivates/Integrates for 1D arrays.  |  
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|  common_readme_functions.py  |  Python  |  Functions for latex readme generator scripts  |  
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|  correlator_reader.py  |  Python  |  Read data in that is required for the correlator  |  
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|  csv_handler.py  |  Python  |  Reads CSV columns as lists and writes lists to a CSV file  |  
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|  data_handler.py  |  Python  |  Reads/writes BIL and BSQ files  |  
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|  flightlineclass.py  |  Python  |  Class to hold info on Eagle/Hawk flight lines (used in generateKMLforPI.py)  |  
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|  folder_structure.py  |  Python  |  Holds the current arsf folder structure  |  
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|  hyperconfigutils.py  |  Python  |  Set of functions for reading and checking hyperspectral config files  |  
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|  kml_writer.py  |  Python  |  Creates and writes KML files.  |  
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|  las1_3_handler.py  |  Python  |  Reads LAS 1.3 files  |  
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|  libgpstime.py  |  Python  |  Converts GPS time-of-week to human-readable format and vice-versa  |  
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|  liblogwriter.py  |  Python  |  Gets mean altitude, heading and speed from an SBET file for a number of Eagle or Hawk lines  |  
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|  rcdclasses.py  |  Python  |  Class for holding RCD image information (used in generateKMLforPI.py)  |  
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|  sbet_handler.py  |  Python  |  Functions to manipulate SBET files, also limited AISA nav file support  |  
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|  sol_reader.py  |  Python  |  Sol reading library  |  chrfi 
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|  Script  |  Language  |  Use  |  Author 
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|  arsf_processing_monitor.py  |  Python  |  Part of old processing job submission system  |  
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|  az_log_parser.py  |  Python  |  Parse output from az* programs to remove cruft - not kept up to date with newer versions and possibly too ambitious  |  
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|  create_lidar_readme.py  |  Python  |  Creates a .txt ReadMe for lidar deliveries  |  
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|  fastcopy_arsf_proj_dir.sh  |  bash  |  Script to make a workspace copy of a project directory (ie. avoid copying raw files, etc)  |  
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|  generate_mask.py & generate_mask.sh  |  Python  |  Script for generating mask file for use in GRASS for old Optech LiDAR  |  
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|  generate_runscripts.py  |  Python  |  Generates AZ runscripts or config files for hyperspectral data processing  |  mark1/benj 
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|  gtiff2jpg.py  |  Python  |  Convert GeoTIFFs to JPEGs  |  
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|  kqsub  |  bash  |  Handy for quick submission of individual flightlines and sct values. Designed for use with old rune/runh scripts  |  
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|  kmlise_project.py  |  Python  |   |  
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|  lidar2dem.sh  |  bash  |  Generates an azgcorr-format ASCII DEM from old Optech lidar point cloud files  |  
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|  lidar_histogram.py & lidar_histogram.sh  |  Python  |  Reads old Optech LiDAR files and outputs a numeric histogram for use in filtering  |  
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|  make_delivery_folder.sh  |  bash  |  Old script for making deliveries  |  
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|  ppv_to_envi_igm.py  |  Python  |  Converts azgcorr's ppv (per-pixel view vector) output to an ENVI IGM  |  chrfi 
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|  trim_lidar.sh  |  bash  |  Cuts UTM zone number off old Optech LiDAR point cloud files  |  
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|  unpack_file_check.py  |  Python  |  Unpacking check files script  |  
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|  unpack_folder_structure.py  |  Python  |  Unpacking check the folder structure  |  
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