Please keep this page updated. Also please keep it sorted in a sensible order or we're never going to be able to find anything...
| Script | Language | Use | Author
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| alspp.exe | bash | Runs wine version of ALSPP |
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| arsf_winesetup.sh | bash | Configure wine environment for ARSF users |
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| attune | bash | Runs wine version of Attune (boresight calibration) |
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| batch_fw_class.sh | bash | Runs get_class_las on full directories, so it doesn't have to be done one by one. Does NOT check if las files are sorted | dap
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| check_ascii_lidar.sh | bash | Checks the ASCII LiDAR files in the delivery for erroneous data |
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| check_ascii_lidar | Binary (C) | Checks the ASCII LiDAR files in the delivery for erroneous data, prints the bounds of the ascii file |
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| classify_las | Binary (C) | LiDAR classification |
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| classify_las_files.sh | bash | Runs classify_las on a set of LAS files using a specified classification algorithm |
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| create_latex_lidar_readme.py | Python | Creates a LaTeX file for generating a PDF read-me for delivery |
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| demcompare.py | Python | Used to compare lidar patched aster dems and raw aster dems | stgo
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| fugroviewer.exe | bash | Runs wine version of Fugroviewer |
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| fwf_extract.py | python | Extracts waveform data for specified area |
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| getDEMbufferpy | Python | Get the buffer size around LiDAR data for use when creating a DEM for use with apl |
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| get_class_las | c++ | Copy the classification from one las file to another | unknown - adbe?
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| get_first_return.sh | bash | Creates new ASCII lidar files with 1st returns only |
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| import_ldr_txt_to_grass.sh | bash | Imports lidar ascii file into grass (run from within grass) | mark1
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| lag | Binary (C++) | LiDAR file viewer | harg + chrfi
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| las2txt.sh | bash | Convert a directory of LAS files or a single LAS file into ascii format |
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| las_hdr_pop.py | Python | Populates LAS file headers with information that may have been lost: min and max of x,y,z and number of points by return | knpa
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| las_merge.sh | bash | Merges sets of LAS files of the form *_000.LAS, *_001.LAS... etc. together. Can also split a LAS file into several. |
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| las_sampler.py | Python | Samples a LAS file at a specified interval and creates an output LAS file of these points | knpa
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| las_single_class.py | Python | Classifies all points as a user defined number (quite slow) | knpa
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| LASsorter | Python | sorts Las files by time, x, y, z , ascending and descending |
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| leica_photo_processing | bash | Runs wine version of Leica's photo processor |
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| lidardem.sh | Bash | Create a DEM from LiDAR data either las of ascii format |
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| lidar_aster_dem.sh | Bash | Create a DEM from LiDAR and aster data, wrapper from lidardem.sh and asterdem.sh |
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| lidar_stats.py | Python | Extracts statistics from a set of LAS files | emca
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| make_lidar_delivery.py | bash | Create a LiDAR delivery folder |
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| lidar_intensity.sh? | bash | Create a lidar intensity image from ascii / las + output jpgs + use vectors |
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| pt_cloud_filter | Binary (C) | Removes points of a specified classification from ascii lidar point cloud | knpa
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| split_las.py | Python | Splits las files using lasmerge. | tipo
|
| Script | Language | Use | Author
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| adjustBPF.py | Python | Generate a bad pixel file in CSV for a delivery, uses the CSV bad pixel file from calibration |
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| aplxml_delivery_wrapper | Python | Generate an aplxml command for a flight in delivery format |
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| bil_binning.py | Python | Spectrally bins (x2) a hyperspectral raw file | knpa
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| bounding_box.py | Python | Get the North/South/East/West extent of a number of raw hdr files in bng coords | knpa
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| cal_radiometric.py | Python | Generates a calibration curve in each band given input data in BIL or BSQ format and a known lamp file | benj
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| correlate.py | Python | Wrapper for phasecorrelator.py |
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| check_apl_cmd | bash | Runs the apl commands in the config file for all level1 flightlines, output to tmp_cmd_check dir | adbe
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| check_bil.py | Python | Checks quality of bil files in hyperspectral delivery | adbe
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| check_fsm.py | Python | Works out the corrected value for frame shift smear at a given band assuming a constant DN value through the spectrum | benj
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| check_qpftiming.py | Python | Test specified Eagle/Hawk framerates against actual framerates calculated from qpfTiming | benj
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| checkpeaks.py | Python | Matches measured spectral lines to fityk-detected peaks and eagle/hawk pixel numbers for use in spectral calibration | benj
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| create_latex_hyperspectral_readme.py | Python | Create a LaTeX file for a PDF Readme for Hyperspectral azgcorr deliveries |
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| create_latex_hyperspectral_apl_readme.py | Python | Create a LaTeX file for a PDF Readme for Hyperspectral APL deliveries |
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| dimfixer.py | Python | Truncates BIL files so that the file size matches what the header file says it should | benj
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| dummy_linecount.py | Python | Replaces a broken line counter on the first band of eagle and hawk (values 0 to number of lines) | knpa
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| fastcheckoverflows.py | Python | Checks a BIL or BSQ file to see if it contains a specified overflow value | benj
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| fastQC | Binary (C) | Program for viewing BIL files (raw data or level 1) | harg
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| gen_bandsets.py | Python | Generates bandset (.prn, .bnd, .wls) files from a wavelength scale file | benj
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| gen_synth_radcal.py | Python | Generates a synthetic Eagle or Hawk calibration file | benj
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| gen_synth_raw.py? | Python | Generates a synthetic Eagle or Hawk dataset | benj
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| gen_synth_sbet.py? | Python | Generates a synthetic SBET file | benj
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| generate_prn.py | Python | Generates a .prn file from some subset of bands in a given .wls file | benj
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| generate_apl_runscripts.py | Python | Generates config file for APL hyperspectral processing |
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| get_ascii_fov_for_level1.py | Python | Generates an ascii file containing binned and trimmed sensor fov view vectors for level 1 files | mark1
|
| get_boresight_vals.py | Python | Extracts boresight values for given day from csv file |
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| get_calib_vals.py | Python | Extracts calibration file names for given day from data file |
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| gen_eg_cmds.py | Python | Generates example commands for APL for the read me file |
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| get_sbet_bounds.py | Python | Gets North/South/East/West extent of (part of) an SBET file in lat/lon | benj
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| getposition | Python | Gets position information at from an SBET file for a specified time (or file limits) | benj
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| getsync.py | Python | Finds sync records on one or more AISA nav files |
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| gettiles.sh | bash | Determines BNG grid squares for flight from Eagle/Hawk header files | benj
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| hdr_fps_check.py | Python | Checks if a Specim file has a mismatch between recorded and actual frame rate (Hawk problem) |
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| hyper_latex_table_tools.py | Python | Python tools for hyperspectral readme table creation |
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igm2map.sh
igm2map.pro | bash | Script to use IGM files to generate a GLT file and map level 1 data |
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| interleave_convert.py | Python | Convert interleave of a 3D file between BIL/BSQ |
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| logwriter.py | Python | Outputs mean altitude, heading and speed from an SBET file for a number of Eagle or Hawk lines | benj
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make_mosaic.sh
make_mosaic.grass | bash | Script to convert GeoTIFFs into JPGs and create a mosaic image (with vectors) |
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| make_hyper_delivery.py | Python | Make a hyperspectral delivery fro APL data |
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| match_dark_frames.py | Python | Checks which of a selection of Eagle/Hawk header files have compatible binning, framerate and integration time settings | benj
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| mergeCFSync.py | Python | Merges a .cfg and a .sync (eagle/hawk line sct offsets) |
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| nav2txt | Binary (C) | Output contents of an AISA nav file to an ASCII text file |
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| NCom2SBET | Binary (C) | Convert NCom .nav files to sbet format | dac
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| new_nav_file_fixer.py | Python | Script to remove once-per-second sync messages from a eagle/hawk nav file that were introduced with the firmware upgrade in October 2011 and sometimes break aplcorr | knpa
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| phasecorrelator.py | Python | Perform phase correlation on a lidar intensity image and a hyperspectral image |
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| plot_1b_spectra.py | Python | Plot spectral profile from BIL file for a given pixel and line | dac
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| process_specim_apl_line.py | Python | Process the specim data using APL |
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| qsub_correlate.py | Python | Submit a correlation job to the grid |
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| process_specim_line.py | Python | Runs az suite on specified Eagle/Hawk flightline for processing | benj
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| run_calibration.py | Python | Master script for running calibration scripts | benj
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| sbet_datum_offset.py | Python | Change altitudes in sbet file from EGM96 datum to WGS-84 elipsoid | dac
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| split_autodark.py | Python | Script to split Eagle or Hawk raw files containing autodark frames into a light file and a dark file. | benj
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| splitline.py | Python | Script/Library for splitting Eagle/Hawk flightlines, using headers |
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| slice_nav.py | Python | Cuts a chunk of an AISA nav file out into a smaller nav file |
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| specim_gap_check.py | Python | Searches Eagle/Hawk raw files for dropped frames by looking at the band 1 frame counter |
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| specim_qsub.py | Python | Submits an ARSF project for processing through the grid engine | benj
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| split_bils.py | Python | Splits hyperspectral lines using apl processing | tipo
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| update_delivery_mask_headers.py | Python | Re-writes the comment in the APL level 1 mask header files so that it refers to re-named level-1 file. Run after delivery has been created |
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| wavelength_scale.py | Python | Generates a new wavelength scale from matching spectral peaks | benj
|
| Script | Language | Use | Author(s)
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| add_to_dem.sh | bash/grass | Adds an ascii or binary grid to a DEM - useful when doing geoid-spheroid seperation | knpa
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| archiving_tarballer.sh | bash | Tarballs projects for NEODC | mggr/knpa
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| asterdem.sh | Bash | Creates a ASTER DEM for use with aplcorr | knpa/adbe
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| atcor | bash | Runs ATCOR-4 |
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| auto_grass_vector_tiff_conversion_driver.sh auto_grass_vector_tiff_conversion_control_script.grass | Python | uses grass to produce tiff images of vectors |
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| binary_converter.py | Python | Converts binary files from one data type to another (eg. Float32 -> Int16) |
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| bil2tiff | Bash | Convert bil files to geotiffs using gdal |
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| bnglookup.py | Python | Converts BNG numeric grid references to OS grid square co-ordinates |
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| build_structure.py | Python | Allows easy building of project directory structure from the command line. |
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| checkoverflows.py | Python | Checks binary data files for presence of a specified overflow value |
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| convert_delivery.sh | Bash | Will convert a delivery to a new project code and PI name. Can also be used on single deliveries to correct PI/proj-code inconsistencies |
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| convert_nonuk_dem.sh | Bash / Grass | Convert a non-UK DEM into APL format (may have to be in WGS84 heights?) |
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| convert_uk_dem.sh | Bash / Grass | Convert a UK DEM into APL format |
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| createimage.py | Python | Convert file formats and create images |
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| data_arithmetic.py | Python | Performs an arithmetic operation on all of the values from two data files and writes the results to an output data file |
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| demgen.py | Python | Reads eagle or hawk header files and SBET file to generate a list of the DEM tiles that the SBET covers |
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| demhdr_az2grass.sh | bash | Converts dems from az format header to grass header |
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| demheaderconvert.sh | bash | Converts dems from grass format header to az header |
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| doc2pdf.py | Python | Converts .doc or .odt files to PDF format |
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| embargocheck.py | Python | Tests if a project folder is still in embargo (1 year from last delivered data) | stgo
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| DocumentConverter.py | Python | Converts between various document formats using Open Office |
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| findbaseline.py | Python | Script to find the baseline value of a list of numbers containing value spikes. Intended for part of Specim cal procedure. |
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| fix_naughty_chars.py | Python | Finds linux-unfriendly characters in filenames |
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| fixnames_sct.py | Python | Auto-renames (line numbers and removes sct section) level 1, level 3, screenshots or rcd images/thumbnails/raws for a delivery. |
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| freelook | bash | Runs ENVI Freelook |
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| gen_fityk_script.py | Python | Generates a fityk script file that can be used to fit peaks to particular datasets |
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| generate_readme_config.py | Python | Creates a config file for hyperspectral and camera read_me generators |
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| generateKMLforPI.py | Python | Generate a KML file containing Eagle, Hawk or RCD information |
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| GML2Shape.sh | bash | Convert GML Vector files to Shapefiles |
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| gpstime | Python | Converts GPS time-of-week to human-readable format and vice-versa |
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| hdf_output.py | Python | Lists contents of an HDF file to the terminal |
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| hdf_to_bil.py | Python | Extracts navigation data from hdf files to a bil file | chrfi/knpa
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| julian | CShell | Converts between julian day+year and day/month/year |
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| kmloverview_all_projects_this_year.py | Python | Generate KML Overview for all projects in repository for a given year |
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| ll2bng.sh | bash | Converts specified lat/lon into BNG co-ordinates (wrapper around appropriate proj command) |
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| lsolder | bash | Like ls, but can filter list to get files/directories older than a certain time |
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| mask_bad_pixels.py | Python | Sets defined bad pixels in a BIL or BSQ file to be a mask value |
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| make_delivery_letter_email.py | Python | Automatically produce delivery letters and emails for a PI |
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| make_kmloverview.py | Python | Make the KML file and overview support files - part of unpacking procedure |
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| nextmapdem.sh | bash | Generates a DEM from NextMap data | benj/mggr/knpa
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| projdir | bash | Automatically CDs to a project directory | anch
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| proj_tidy.sh | bash | Checks that a specified project conforms to the current defined structure and file name formats | knpa
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raw_eagle_hawk_bil2jpg.sh
raw_eagle_hawk_bil2jpg.grass | Create JPGs of raw eagle/hawk data for KML overview |
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| spatial_average.py | Python | Averages a BIL or BSQ file in the spatial direction |
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| symlink_src_dir.sh | bash | Symlinks all files in a source directory into a target directory |
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| teqc | Binary (third-party) | Program for slicing/splicing/fiddling with RINEX or other GPS base station data (like raw data) |
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| times4grafnav.py | Python | Searches E/H headers and gets start/stop times for importing into Grafnav to show on trajectory |
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| trmdatefinder.py | Python | Extracts date from Trimble GPS format file names |
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| Script | Language | Use | Author
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| alphaconv.py | Python | Functions to convert numbers to letters and back (A=1, B=2 etc) |
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| arsf_database.py | Python | Functions to access key/value ARSF database (please use arsf_db_reader.py) |
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| arsf_db_reader.py | Python | Provides classes and functions to read from the ARSF database |
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| band_reader.py | Python | Reads AISA band (.prn) files |
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| configSorter.py | Python | Sorts config files into sensible order (can also be executed directly) |
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| convert_interpolate.py | Python | Interpolates an array and/or many arrays wrt. one array. Finds peaks/Derivates/Integrates for 1D arrays. |
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| common_readme_functions.py | Python | Functions for latex readme generator scripts |
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| correlator_reader.py | Python | Read data in that is required for the correlator |
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| csv_handler.py | Python | Reads CSV columns as lists and writes lists to a CSV file |
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| data_handler.py | Python | Reads/writes BIL and BSQ files |
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| egm96 | Python / Fortran | Calculate offset between EGM96 and WGS-84. Python wrapper for Fortran functions | dac
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| flightlineclass.py | Python | Class to hold info on Eagle/Hawk flight lines (used in generateKMLforPI.py) |
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| folder_structure.py | Python | Holds the current arsf folder structure |
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| geographic.py | Python | For converting between different geographic coordinate systems | knpa
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| GRASS_library.py | Python | For working with Envi DEM files in grass | stgo
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| hyperconfigutils.py | Python | Set of functions for reading and checking hyperspectral config files |
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| kml_writer.py | Python | Creates and writes KML files. |
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| las1_3_handler.py | Python | Reads LAS 1.3 files |
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| libgpstime.py | Python | Converts GPS time-of-week to human-readable format and vice-versa |
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| liblogwriter.py | Python | Gets mean altitude, heading and speed from an SBET file for a number of Eagle or Hawk lines |
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| navparser.py | Python | Basic Specim nav file parser for ASCII nav files |
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| project_info.py | Python | Returns basic project info (project code, jday etc) from an available source |
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| rcdclasses.py | Python | Class for holding RCD image information (used in generateKMLforPI.py) |
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| sbet_handler.py | Python | Functions to manipulate SBET files, also limited AISA nav file support |
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| sol_handler.py | Python | Sol handling library | chrfi and adth
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| Script | Language | Use | Author
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| arsf_processing_monitor.py | Python | Part of old processing job submission system |
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| az_log_parser.py | Python | Parse output from az* programs to remove cruft - not kept up to date with newer versions and possibly too ambitious |
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| create_lidar_readme.py | Python | Creates a .txt ReadMe for lidar deliveries |
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| fastcopy_arsf_proj_dir.sh | bash | Script to make a workspace copy of a project directory (ie. avoid copying raw files, etc) |
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| generate_mask.py & generate_mask.sh | Python | Script for generating mask file for use in GRASS for old Optech LiDAR |
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| generate_runscripts.py | Python | Generates AZ runscripts or config files for hyperspectral data processing | mark1/benj
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| gtiff2jpg.py | Python | Convert GeoTIFFs to JPEGs |
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| kqsub | bash | Handy for quick submission of individual flightlines and sct values. Designed for use with old rune/runh scripts |
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| kmlise_project.py | Python | |
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| lidar2dem.sh | bash | Generates an azgcorr-format ASCII DEM from old Optech lidar point cloud files |
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| lidar_histogram.py & lidar_histogram.sh | Python | Reads old Optech LiDAR files and outputs a numeric histogram for use in filtering |
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| make_delivery_folder.sh | bash | Old script for making deliveries |
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| ppv_to_envi_igm.py | Python | Converts azgcorr's ppv (per-pixel view vector) output to an ENVI IGM | chrfi
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| trim_lidar.sh | bash | Cuts UTM zone number off old Optech LiDAR point cloud files |
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| unpack_file_check.py | Python | Unpacking check files script |
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| unpack_folder_structure.py | Python | Unpacking check the folder structure |
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| make_lidardem_or_intensity.sh make_lidardem_or_intensity.grass? | bash | Create a lidar dem or intensity image from ascii lidar files |
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